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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917990.1_cds_XP_016467522.1_60260
CDS Infomation

[gene=LOC107790130] [db_xref=GeneID:107790130] [protein=ubiquitin carboxyl-terminal hydrolase 19-like] [protein_id=XP_016467522.1] [location=join(45255..45526,47168..47276,47354..47442,47788..47873,47972..48134,48276..48399,48592..48749,49510..49594,52183..52395,53374..53435,53591..54641)] [gbkey=CDS]
Sequence

ATGCATGTAGCAGTGGATCTGAATTCCTACTTGCACTTTGTATTGACGGCCATAGTCATC
GTAGTTTCACTCCTCTACCTCGTTAAGACCACCGCCTCCAAGTACTTTCTCGTCGACGAC
GAGTCTAATTTTGATTCTGCTGCTTCGCCGCCGACAGCGAGTTTTGGTGATCGGAGAATG
GAGGAGCCGCCGACAACAACGCCGGAAGGTTGCGGCGTATGCGGTAGTATCACTTCTAAG
CAATGCTCTCGTTGCAAGATGGTTAAATACTGCTCTGAAGCTTGCCAAAGATCTCACTGG
AACTCTGGGCATAGATTTAAATGCAAGGATTTTCGTAAAAGCAACTCTTCTGCAGCTTCA
CTGATCCCTGAGTCAATGAAGGTACTTTTCCCATATGAGGAATTCTTGGAACTTTTTAAC
TGGGATAGCTCAGGTTTCCCACCTTGTGGGCTCCTAAATTGTGGAAACAGCTGCTTTGCC
AATGTGGTTCTACAATGTCTGACATACACTAAGCCACTTGTTGTCTACTTGTTGGGAAAA
GGCCATTTGAGAGAATGTAGGCGGAATGGTTGGTGCTTCCTTTGTGAATTTCAACACCAT
GTAGAACGGGCTAGTCAAAGTCAGCAGCCCTTCTCACCAATTAACATACTTTCACGGTTG
CCCAATATTGGTGGTAATCTTGGGTATGGTAAACAGGAGGATGCTCATGAATTTATGAGG
TTTGCTATTGACACGATGCAATCTGTGTGCCTTGATGAATTTGGTGGAGAGAAGGCTGTT
CCTCCTAACACACAGGAGACGACACTTATTCAACACATATTTGGTGGTCACCTGCAATCT
CAGGTCATATGTACAGAATGCAATAATGTTTCAGATCAGTTTGAGAATATGATGGATCTG
ACCGTAGAAATTCACGGGGATGCTGAATCTCTGGAGGAATGCTTGGATCAATTCACAGCA
AGAGAGTGGCTAGATGGAGATAACTTGTATAAATGTGATGGATGCAATGACTATGTCAAG
GCATGGAAGCGCCTAATGGTCAGGAGGGCACCAAATATCTTAACAATTGCCTTGAAAAGG
TTTCAGAGTGGTAGGTTTGGTAAATTGAATAAGAGGGTGAGTTTCCCTGAAAGATTGGAT
CTCCATCCGTACGTGAGCAAAGCAGGAGACGGCAATGATATTTACAAGCTGTATGCAGTT
ATTGTTCACGTGGACATGTTGAATGCATCATTTTTCGGCCATTACATATGCTATATCAAG
GATTTCCGCGGAAGTTGGTACAGGATTGATGATTGTAAGGTGGTTAGTGTTGATTTGGAT
GAAGTGCTTTCGCAGGGAGCATACATGCTCTTATATAGCAGGATCTGCCCTCGGCCGACA
TCCTTATTTCCTCTTGAACTATTAAAGAAAGAGGACCAGGATACAGTTAAAGTGGAAGAC
AAGTCAGGTCCCACAGACCAACCTGTTGAATGTCTCAGCGCAACAGTGTCTCCGGCTGCA
GTTGTTGATTCTGTTTCACCGCCAAGTTTTAATGGTTCAGAAGATAAGATTATTGGGGCT
AAAGTGGAGTTATCCTCCTCAACCAACCCTGAGGACAGAATGGAGCATCAGGAGGTAGAT
TTTAGGGCAAGTTCTCATGTCCAGCAGGAATTGCAGGATGTTAAACTATCCAGTGAAGCT
ACAGGAACTTCTTGCCTTAGAATGGTATCCAATAGTTCATCTGGTGCTAGTTCTTCGGCT
GAAGTTGAGATTCAGAAACGTGAAACAAAATCCGCTGTTTCTGACAGTAAAGATGACACT
GAACCATGCCAAAGAACCACCAACGACCGTCTCTTGAGTTCTTCATTTACTGAGGATTCT
GTAGCCACAAATGGTGATATGCTGGATGATGCTTCATCCTCTGCCTCAAGCTTTGGTGTC
ATCTCAGACAATGCGAAGTTACAAAATTCCACTCAAATGCCAGGCAAAACTAACCAGAAC
AAAGAATTTTCATCTCACGGAAGCCACAATGTGGTCCTGAAATCAGGTGGAGGGAGTTCT
TCTGAACCAAAGTTAAAGCCACTTTTTGCCCCTGGCTTCCTTGGGAAACGCCCATCGGAC
AGATGTGCCAAGAAAGATGTCTCATGGGAAGTTTGCCAGAATAGCACCCTAAATGGTTTG
ACAAATGCATGTGCCAAGCCTGAATTGTCCGATGAAAACCATATTGATATGGATGACCAA
GATACTAATATGGAAGAATTTTTTTTTGTTTCTAGTAATGCTTCAATTGGACGAGCTGCA
GTTCCTCTTAATGAGACTAAGATGGCCACCTGTAAATCTGGGGAATCACGTCACCTTGAG
AATGGAGATTCTGCTGTCCCGATGGAATGTGATTGGAGCAACGATGTCGCCATTAGTGAT
GAAAAGTCATAG

Peptide Sequence

PEP ID

XP_016467522.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Nicotiana tabacum]
Sequence

MHVAVDLNSYLHFVLTAIVIVVSLLYLVKTTASKYFLVDDESNFDSAASPPTASFGDRRM
EEPPTTTPEGCGVCGSITSKQCSRCKMVKYCSEACQRSHWNSGHRFKCKDFRKSNSSAAS
LIPESMKVLFPYEEFLELFNWDSSGFPPCGLLNCGNSCFANVVLQCLTYTKPLVVYLLGK
GHLRECRRNGWCFLCEFQHHVERASQSQQPFSPINILSRLPNIGGNLGYGKQEDAHEFMR
FAIDTMQSVCLDEFGGEKAVPPNTQETTLIQHIFGGHLQSQVICTECNNVSDQFENMMDL
TVEIHGDAESLEECLDQFTAREWLDGDNLYKCDGCNDYVKAWKRLMVRRAPNILTIALKR
FQSGRFGKLNKRVSFPERLDLHPYVSKAGDGNDIYKLYAVIVHVDMLNASFFGHYICYIK
DFRGSWYRIDDCKVVSVDLDEVLSQGAYMLLYSRICPRPTSLFPLELLKKEDQDTVKVED
KSGPTDQPVECLSATVSPAAVVDSVSPPSFNGSEDKIIGAKVELSSSTNPEDRMEHQEVD
FRASSHVQQELQDVKLSSEATGTSCLRMVSNSSSGASSSAEVEIQKRETKSAVSDSKDDT
EPCQRTTNDRLLSSSFTEDSVATNGDMLDDASSSASSFGVISDNAKLQNSTQMPGKTNQN
KEFSSHGSHNVVLKSGGGSSSEPKLKPLFAPGFLGKRPSDRCAKKDVSWEVCQNSTLNGL
TNACAKPELSDENHIDMDDQDTNMEEFFFVSSNASIGRAAVPLNETKMATCKSGESRHLE
NGDSAVPMECDWSNDVAISDEKS

Transcript Sequence

Gene sequence data has not been registered.